Dynverse
Dynverse
Dynverse is an open set of packages to benchmark, construct and interpret single-cell trajectories. A complete overview of the packages can be found on dynverse.org.
Some of the highlights:
- dyno offers a complete TI pipeline to run & interpret TI outcomes.
- dynbenchmark contains all source code used to replicate the benchmarking study by Saelens and Cannoodt (doi:10.1038/s41587-019-0071-9).
- dyngen is a flexible, multi-modal simulation engine used to study dynamic cellular processes at single-cell resolution (doi:10.1038/s41467-021-24152-2).